STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3518PFAM: aldo/keto reductase; KEGG: ade:Adeh_0544 aldo/keto reductase. (324 aa)    
Predicted Functional Partners:
Tcur_1587
PFAM: aldo/keto reductase; KEGG: mno:Mnod_0968 aldo/keto reductase.
 
 
0.519
Tcur_3517
Hypothetical protein.
       0.462
Tcur_3512
PFAM: AMP-dependent synthetase and ligase; KEGG: dol:Dole_0112 AMP-dependent synthetase and ligase.
  
 0.439
Tcur_1215
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: similar to predicted protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.425
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.