STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3522PFAM: alpha/beta hydrolase fold; KEGG: pna:Pnap_4141 alpha/beta hydrolase fold. (289 aa)    
Predicted Functional Partners:
Tcur_3472
2-oxopent-4-enoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pmu:PM1534 HpaH.
 
 
 0.921
Tcur_3519
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bav:BAV0595 pigment production hydroxylase.
 
   0.920
Tcur_0534
2-oxopent-4-enoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase.
  
 
 0.909
Tcur_3520
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bur:Bcep18194_B1416 ferredoxin.
 
  
 0.887
Tcur_3521
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: pla:Plav_1792 3-oxosteroid 1-dehydrogenase.
 
   
 0.868
Tcur_3516
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_B0654 biphenyl-2,3-diol 1,2- dioxygenase.
 
  
 0.771
Tcur_3509
PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B1448 Rieske (2Fe-2S) protein.
  
 
 
 0.638
Tcur_1249
Hypothetical protein; KEGG: reu:Reut_A1514 steroid delta-isomerase.
 
     0.578
Tcur_3508
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: cti:RALTA_B0487 putative acyl-CoA dehydrogenase protein.
  
   0.578
Tcur_2756
KEGG: cti:RALTA_B0477 hypothetical protein.
  
   
 0.560
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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