STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3816PFAM: copper resistance D domain protein; KEGG: bja:bll4878 copper export protein. (651 aa)    
Predicted Functional Partners:
Tcur_3062
PFAM: cytochrome c class I; KEGG: tbd:Tbd_2545 putative cytochrome c.
 
  
 0.791
Tcur_3061
PFAM: Rieske [2Fe-2S] domain protein; KEGG: vei:Veis_4950 Rieske (2Fe-2S) domain- containing protein.
 
    0.740
Tcur_3076
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.661
Tcur_4429
PFAM: ResB family protein; KEGG: dal:Dalk_1265 ResB family protein.
 
     0.656
Tcur_3063
PFAM: cytochrome c oxidase subunit III; KEGG: pat:Patl_4243 cytochrome c oxidase, subunit III.
 
  
 0.655
Tcur_3060
PFAM: Cytochrome b/b6 domain; KEGG: dar:Daro_0810 cytochrome b/b6, N- terminal:cytochrome b/b6, C-terminal.
 
  
 0.618
Tcur_0554
PFAM: Cytochrome b/b6 domain; KEGG: tmz:Tmz1t_1403 cytochrome b/b6 domain protein.
 
  
 0.601
Tcur_2054
PFAM: copper resistance protein CopC; KEGG: bja:bll4878 copper export protein.
 
   
 0.594
Tcur_3753
PFAM: UvrD/REP helicase; KEGG: met:M446_1084 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
     0.548
Tcur_3815
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: rpa:RPA2863 dihydrolipoamide dehydrogenase.
       0.524
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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