STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3868KEGG: dal:Dalk_1860 hypothetical protein. (266 aa)    
Predicted Functional Partners:
Tcur_4464
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: glo:Glov_2906 xylose isomerase domain protein TIM barrel.
  
    0.566
Tcur_2974
PFAM: HpcH/HpaI aldolase; KEGG: mxa:MXAN_6823 hypothetical protein.
  
  
 0.522
Tcur_3869
KEGG: dol:Dole_1264 hypothetical protein.
       0.519
Tcur_3670
Hypothetical protein; KEGG: GF17743 gene product from transcript GF17743- RA.
  
     0.452
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.439
Tcur_3866
PFAM: beta-lactamase domain protein; KEGG: dal:Dalk_3435 beta-lactamase domain protein.
       0.402
Tcur_1197
KEGG: mxa:MXAN_1877 hypothetical protein.
  
     0.400
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.