STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3897KEGG: cbd:CBUD_0236 alpha/beta hydrolase. (238 aa)    
Predicted Functional Partners:
Tcur_3898
Hypothetical protein.
 
     0.626
Tcur_2489
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: scl:sce8724 transcriptional regulator.
  
     0.617
Tcur_1077
KEGG: hypothetical protein.
 
     0.488
Tcur_3896
PFAM: alpha/beta hydrolase fold; KEGG: afw:Anae109_3959 alpha/beta hydrolase fold.
       0.479
Tcur_4935
PFAM: membrane-flanked domain; KEGG: kpe:KPK_2129 hypothetical protein.
  
     0.471
Tcur_3832
Hypothetical protein; KEGG: similar to BAF57; K11651 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
 
     0.440
Tcur_1759
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
     0.426
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.409
Tcur_4928
Tryptophanyl-tRNA synthetase-like protein; KEGG: pla:Plav_3608 tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.409
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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