STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4141PFAM: type II secretion system protein; KEGG: csa:Csal_1660 type II secretion system protein. (331 aa)    
Predicted Functional Partners:
Tcur_4144
Hypothetical protein; KEGG: GE20743 gene product from transcript GE20743- RA.
 
    0.964
Tcur_4143
KEGG: hypothetical protein LOC700978.
 
   
 0.957
Tcur_4142
PFAM: type II secretion system protein E; KEGG: smt:Smal_2323 type II secretion system protein E.
 
  
 0.953
Tcur_4137
PFAM: TadE family protein.
 
  
 0.938
Tcur_4138
PFAM: TadE family protein; KEGG: rpi:Rpic_4246 TadE family protein.
 
  
 0.938
Tcur_4140
PFAM: type II secretion system protein; KEGG: afw:Anae109_3964 type II secretion system protein.
 
     0.916
Tcur_4135
KEGG: bpe:BP1413 hypothetical protein.
 
     0.902
Tcur_4136
PFAM: TadE family protein; KEGG: dvl:Dvul_1104 von Willebrand factor, type A.
 
     0.887
Tcur_1850
PFAM: type II secretion system protein; KEGG: dvl:Dvul_1107 type II secretion system protein.
  
  
 0.701
Tcur_1853
SMART: AAA ATPase; KEGG: ank:AnaeK_2914 Flp pilus assembly protein ATPase CpaE-like protein.
  
  
 0.681
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.