STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4144Hypothetical protein; KEGG: GE20743 gene product from transcript GE20743- RA. (297 aa)    
Predicted Functional Partners:
Tcur_4143
KEGG: hypothetical protein LOC700978.
 
  
 0.971
Tcur_4141
PFAM: type II secretion system protein; KEGG: csa:Csal_1660 type II secretion system protein.
 
    0.964
Tcur_4140
PFAM: type II secretion system protein; KEGG: afw:Anae109_3964 type II secretion system protein.
 
    0.931
Tcur_4138
PFAM: TadE family protein; KEGG: rpi:Rpic_4246 TadE family protein.
 
    0.921
Tcur_4137
PFAM: TadE family protein.
 
    0.916
Tcur_4135
KEGG: bpe:BP1413 hypothetical protein.
 
     0.901
Tcur_4136
PFAM: TadE family protein; KEGG: dvl:Dvul_1104 von Willebrand factor, type A.
 
     0.889
Tcur_4142
PFAM: type II secretion system protein E; KEGG: smt:Smal_2323 type II secretion system protein E.
 
    0.870
Tcur_4775
Multi-sensor signal transduction histidine kinase; KEGG: bbt:BBta_6262 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein.
  
  
 0.826
Tcur_3555
KEGG: dvm:DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
  
  
 0.824
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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