STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4165PFAM: globin; KEGG: pub:SAR11_1217 globin family protein. (128 aa)    
Predicted Functional Partners:
Tcur_1333
PFAM: globin; KEGG: bba:Bd2638 putative globin.
  
   
0.758
Tcur_2466
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: pna:Pnap_4185 oxidoreductase FAD/NAD(P)- binding subunit; Belongs to the globin family.
  
  
 0.510
Tcur_3449
PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; globin; KEGG: hypothetical protein; K05916 nitric oxide dioxygenase; Belongs to the globin family.
  
  
 0.425
Tcur_1350
Hypothetical protein.
  
  
 0.422
Tcur_2508
PFAM: DSBA oxidoreductase; KEGG: smt:Smal_2969 DsbA oxidoreductase.
  
  
 0.422
Tcur_4166
PFAM: GCN5-related N-acetyltransferase; KEGG: avi:Avi_2225 acetyltransferase.
       0.412
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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