STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4330PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_3474 ABC transporter related. (231 aa)    
Predicted Functional Partners:
Tcur_4329
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
 
 0.996
Tcur_4455
PFAM: protein of unknown function DUF214; KEGG: geo:Geob_2110 protein of unknown function DUF214.
 
 0.989
Tcur_2298
KEGG: bja:bll2870 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.899
Tcur_0348
PFAM: protein of unknown function DUF214; KEGG: scl:sce1111 lipoprotein releasing system transmembrane protein LolC.
 
 
 0.888
Tcur_3682
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
 
 
  
 0.873
Tcur_4331
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein.
 
    0.851
Tcur_4332
Hypothetical protein.
       0.773
Tcur_4333
Hypothetical protein.
       0.773
Tcur_4457
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ank:AnaeK_3255 efflux transporter, RND family, MFP subunit.
 
 
 0.717
Tcur_4658
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_1921 protein of unknown function DUF214.
  
 
 0.650
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.