STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4400PFAM: Luciferase-like monooxygenase; KEGG: rpb:RPB_4430 luciferase-like. (286 aa)    
Predicted Functional Partners:
Tcur_4401
KEGG: bcm:Bcenmc03_6826 hypothetical protein.
 
     0.908
Tcur_4157
KEGG: oca:OCAR_4999 hypothetical protein.
  
     0.671
Tcur_3527
KEGG: reh:H16_B0647 hypothetical protein.
  
     0.611
Tcur_4072
TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: eba:p2A344 LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.563
Tcur_3493
KEGG: abo:ABO_0786 hypothetical protein.
 
     0.559
Tcur_4073
TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase; KEGG: pzu:PHZ_c2547 hypothetical protein.
 
  
 0.537
Tcur_4399
PFAM: protein of unknown function DUF1211; KEGG: pna:Pnap_1340 hypothetical protein.
       0.523
Tcur_2584
PFAM: Luciferase-like monooxygenase; KEGG: rpb:RPB_4431 coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin.
  
     0.498
Tcur_3511
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_1940 short-chain dehydrogenase/reductase SDR.
 
     0.498
Tcur_3489
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0096 branched chain amino acid ABC transporter inner membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.459
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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