STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4563PFAM: chitin-binding domain 3 protein; KEGG: pae:PA0852 chitin-binding protein CbpD precursor. (212 aa)    
Predicted Functional Partners:
Tcur_2436
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; Parallel beta- helix repeat; KEGG: hypothetical protein.
  
   
 0.724
Tcur_1738
PFAM: glycoside hydrolase family 6; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
   
 0.720
Tcur_1429
PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: hypothetical protein.
  
     0.534
Tcur_3233
Peptidase M4 thermolysin; Extracellular zinc metalloprotease.
   
  
 0.523
Tcur_3601
Hypothetical protein; KEGG: cak:Caul_3132 xylan 1,4-beta-xylosidase.
  
  
 0.481
Tcur_4514
KEGG: mxa:MXAN_0777 MerR family transcriptional regulator.
  
    0.448
Tcur_4560
PFAM: WD-40 repeat protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein; KEGG: ade:Adeh_2732 heat repeat-containing PBS lyase.
 
     0.444
Tcur_3610
Serine/threonine protein kinase; PFAM: Lanthionine synthetase C family protein; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: smt:Smal_2130 serine/threonine protein kinase.
  
     0.443
Tcur_4562
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.404
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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