STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4581KEGG: bbt:BBta_0473 phosphoheptose isomerase. (203 aa)    
Predicted Functional Partners:
Tcur_4583
KEGG: reh:PHG074 putative sedoheptulose 7-phosphate isomerase.
 
  
 
0.981
Tcur_4584
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: gsu:GSU0306 hydrogenase maturation protein HypF.
     
 0.801
Tcur_4582
Hypothetical protein.
       0.787
Tcur_4580
PFAM: transcriptional regulator PadR family protein; KEGG: dat:HRM2_46180 putative transcriptional regulator.
       0.701
Tcur_4594
PFAM: nickel-dependent hydrogenase large subunit; KEGG: reh:PHG065 putative [NiFe] hydrogenase large subunit.
 
   
 0.521
Tcur_4598
KEGG: reh:PHG069 hypothetical protein.
 
   
 0.501
Tcur_4593
PFAM: nitrogen-fixing NifU domain protein; KEGG: reh:PHG066 hypothetical protein.
 
     0.482
Tcur_4592
KEGG: reh:PHG067 hypothetical protein.
 
     0.481
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.459
mshA
UDP-N-acetylglucosamine; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
 
  
 0.457
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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