STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4591Hypothetical protein. (71 aa)    
Predicted Functional Partners:
Tcur_4592
KEGG: reh:PHG067 hypothetical protein.
       0.810
Tcur_4589
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: xau:Xaut_2185 hydrogenase assembly chaperone HypC/HupF.
       0.743
Tcur_4590
Hypothetical protein; KEGG: MUC21; mucin 21, cell surface associated.
       0.737
Tcur_4588
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: bbt:BBta_0474 hydrogenase expression/formation.
       0.675
Tcur_4587
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: rpt:Rpal_1170 hydrogenase expression/formation protein HypE.
       0.674
Tcur_4593
PFAM: nitrogen-fixing NifU domain protein; KEGG: reh:PHG066 hypothetical protein.
       0.581
Tcur_4594
PFAM: nickel-dependent hydrogenase large subunit; KEGG: reh:PHG065 putative [NiFe] hydrogenase large subunit.
       0.581
Tcur_4595
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: reh:PHG064 putative [NiFe] hydrogenase small subunit.
       0.488
hypA
Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.487
Tcur_4598
KEGG: reh:PHG069 hypothetical protein.
       0.487
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.