STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4786Hypothetical protein. (116 aa)    
Predicted Functional Partners:
Tcur_4787
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: acp:A2cp1_3403 RNA polymerase, sigma-24 subunit, ECF subfamily.
  
    0.809
Tcur_4788
KEGG: acp:A2cp1_3404 hypothetical protein.
       0.682
Tcur_4822
KEGG: mxa:MXAN_5618 Aha1 domain-containing protein.
  
     0.484
Tcur_4789
PFAM: filamentation induced by cAMP protein Fic; KEGG: rbo:A1I_04870 Fic family protein.
       0.474
Tcur_1486
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A4891 monooxygenase, FAD- binding.
 
     0.473
Tcur_3820
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_4255 AAA ATPase, central region.
  
  
  0.462
Tcur_1923
PFAM: protein of unknown function DUF1470; KEGG: cak:Caul_4029 hypothetical protein.
  
     0.457
Tcur_2571
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpe:BP2857 LysR family transcriptional regulator.
 
     0.438
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.