STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4808PFAM: protein of unknown function DUF107; KEGG: sfu:Sfum_2309 protein of unknown function DUF107. (143 aa)    
Predicted Functional Partners:
Tcur_4807
PFAM: band 7 protein; SMART: band 7 protein; KEGG: mxa:MXAN_3984 SPFH domain-containing protein/band 7 family protein.
 
  
 0.965
Tcur_4688
PFAM: band 7 protein; KEGG: mxa:MXAN_3571 hypothetical protein.
  
  
 0.796
cobS
Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.757
Tcur_1317
TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dde:Dde_3181 precorrin-3 methyltransferase.
  
    0.618
Tcur_1934
PFAM: protein of unknown function DUF307; KEGG: rpb:RPB_4652 hypothetical protein.
   
    0.583
Tcur_4816
Hypothetical protein.
     
 0.509
Tcur_1571
PFAM: protein of unknown function DUF1707; KEGG: mfa:Mfla_0149 hypothetical protein.
  
  
 0.481
Tcur_1314
KEGG: cvi:CV_1564 precorrin-4 C11-methyltransferase protein; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
  
 0.466
Tcur_4809
Sulfotransferase; KEGG: reu:Reut_A1533 sulfotransferase.
       0.445
Tcur_4496
PFAM: membrane-flanked domain; KEGG: sde:Sde_3048 hypothetical protein.
 
    0.423
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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