STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4835PFAM: putative esterase; KEGG: mxa:MXAN_4935 putative esterase. (341 aa)    
Predicted Functional Partners:
Tcur_1032
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msl:Msil_3430 alcohol dehydrogenase GroES domain protein.
  
 
 0.547
Tcur_2454
TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6856 alcohol dehydrogenase class 3.
  
 
 0.547
Tcur_4959
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rpe:RPE_0587 alcohol dehydrogenase GroES domain protein.
  
 
 0.547
Tcur_1930
KEGG: oca:OCAR_5317 hypothetical protein.
  
     0.522
Tcur_4756
PFAM: Acyl transferase; KR domain protein; Beta- ketoacyl synthase; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
 
   
 0.497
Tcur_3073
Hypothetical protein; KEGG: geo:Geob_2630 tetratricopeptide TPR_2 repeat protein.
 
  
 0.477
Tcur_0401
Hypothetical protein.
  
  
 0.413
Tcur_2039
PFAM: protein of unknown function DUF156; KEGG: dia:Dtpsy_1807 protein of unknown function DUF156.
  
  
 0.413
Tcur_3133
PFAM: protein of unknown function DUF156; KEGG: cvi:CV_3642 hypothetical protein.
  
  
 0.413
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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