STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcav_0537PFAM: ABC transporter. (306 aa)    
Predicted Functional Partners:
Bcav_0536
Anibiotic ABC transporter efflux pump.
  
 0.956
Bcav_0538
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.827
Bcav_3754
Putative ABC transporter permease protein.
  
 0.817
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.602
Bcav_0540
PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: heavy metal translocating P-type ATPase; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
   0.580
metN
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.571
Bcav_3633
PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
  
 0.567
Bcav_0539
PFAM: Bacterial regulatory protein, arsR family.
       0.546
Your Current Organism:
Beutenbergia cavernae
NCBI taxonomy Id: 471853
Other names: B. cavernae DSM 12333, Beutenbergia cavernae DSM 12333, Beutenbergia cavernae str. DSM 12333, Beutenbergia cavernae strain DSM 12333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.