Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_0826 | Bcav_0827 | PFAM: Glycosyl hydrolases family 32 N terminal. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.875 |
Bcav_0826 | Bcav_0828 | PFAM: Glycosyl hydrolases family 32 N terminal. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.888 |
Bcav_0826 | Bcav_0829 | PFAM: Glycosyl hydrolases family 32 N terminal. | PFAM: Bacterial extracellular solute-binding protein. | 0.918 |
Bcav_0826 | Bcav_0830 | PFAM: Glycosyl hydrolases family 32 N terminal. | Hypothetical protein. | 0.470 |
Bcav_0827 | Bcav_0826 | PFAM: Binding-protein-dependent transport system inner membrane component. | PFAM: Glycosyl hydrolases family 32 N terminal. | 0.875 |
Bcav_0827 | Bcav_0828 | PFAM: Binding-protein-dependent transport system inner membrane component. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.957 |
Bcav_0827 | Bcav_0829 | PFAM: Binding-protein-dependent transport system inner membrane component. | PFAM: Bacterial extracellular solute-binding protein. | 0.956 |
Bcav_0827 | Bcav_0830 | PFAM: Binding-protein-dependent transport system inner membrane component. | Hypothetical protein. | 0.470 |
Bcav_0828 | Bcav_0826 | PFAM: Binding-protein-dependent transport system inner membrane component. | PFAM: Glycosyl hydrolases family 32 N terminal. | 0.888 |
Bcav_0828 | Bcav_0827 | PFAM: Binding-protein-dependent transport system inner membrane component. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.957 |
Bcav_0828 | Bcav_0829 | PFAM: Binding-protein-dependent transport system inner membrane component. | PFAM: Bacterial extracellular solute-binding protein. | 0.958 |
Bcav_0828 | Bcav_0830 | PFAM: Binding-protein-dependent transport system inner membrane component. | Hypothetical protein. | 0.473 |
Bcav_0829 | Bcav_0826 | PFAM: Bacterial extracellular solute-binding protein. | PFAM: Glycosyl hydrolases family 32 N terminal. | 0.918 |
Bcav_0829 | Bcav_0827 | PFAM: Bacterial extracellular solute-binding protein. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.956 |
Bcav_0829 | Bcav_0828 | PFAM: Bacterial extracellular solute-binding protein. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.958 |
Bcav_0829 | Bcav_0830 | PFAM: Bacterial extracellular solute-binding protein. | Hypothetical protein. | 0.473 |
Bcav_0830 | Bcav_0826 | Hypothetical protein. | PFAM: Glycosyl hydrolases family 32 N terminal. | 0.470 |
Bcav_0830 | Bcav_0827 | Hypothetical protein. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.470 |
Bcav_0830 | Bcav_0828 | Hypothetical protein. | PFAM: Binding-protein-dependent transport system inner membrane component. | 0.473 |
Bcav_0830 | Bcav_0829 | Hypothetical protein. | PFAM: Bacterial extracellular solute-binding protein. | 0.473 |
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