Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcav_1069TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083. (191 aa)    
Predicted Functional Partners:
Bcav_1067
PFAM: Protein of unknown function (DUF503).
       0.664
Bcav_1068
Abortive infection protein; PFAM: CAAX amino terminal protease family.
       0.664
Bcav_1070
PFAM: NmrA-like family.
       0.613
Bcav_1071
Transcriptional regulator, HxlR family; PFAM: HxlR-like helix-turn-helix.
       0.613
Bcav_1717
Conserved hypothetical protein.
  
     0.567
Bcav_1066
PFAM: Phosphotransferase enzyme family.
       0.535
Bcav_0334
TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083.
  
     0.455
Bcav_1464
Methyltransferase type 12; PFAM: Methyltransferase domain.
  
     0.414
Your Current Organism:
Beutenbergia cavernae
NCBI taxonomy Id: 471853
Other names: B. cavernae DSM 12333, Beutenbergia cavernae DSM 12333, Beutenbergia cavernae str. DSM 12333, Beutenbergia cavernae strain DSM 12333
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