STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcav_1491PFAM: ROK family. (410 aa)    
Predicted Functional Partners:
Bcav_1490
PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.773
eno-2
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.561
Bcav_1492
Hydrolase; PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain.
       0.553
Bcav_1489
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
  
  
 0.547
Bcav_1486
Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.
  
    0.542
Bcav_1488
PFAM: Phosphotransferase enzyme family.
       0.539
Bcav_1493
Conserved hypothetical protein.
       0.479
Bcav_1483
PFAM: Binding-protein-dependent transport system inner membrane component.
       0.454
Bcav_1485
PFAM: Bacterial extracellular solute-binding protein.
       0.449
Bcav_1484
Fructose-bisphosphate aldolase; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.445
Your Current Organism:
Beutenbergia cavernae
NCBI taxonomy Id: 471853
Other names: B. cavernae DSM 12333, Beutenbergia cavernae DSM 12333, Beutenbergia cavernae str. DSM 12333, Beutenbergia cavernae strain DSM 12333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.