Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bcav_2057 | Bcav_2058 | Bcav_2057 | Bcav_2058 | Transcriptional regulator-like protein. | Conserved hypothetical protein. | 0.994 |
Bcav_2057 | Bcav_2059 | Bcav_2057 | Bcav_2059 | Transcriptional regulator-like protein. | Hypothetical protein. | 0.762 |
Bcav_2057 | Bcav_2062 | Bcav_2057 | Bcav_2062 | Transcriptional regulator-like protein. | PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU). | 0.642 |
Bcav_2057 | Bcav_2063 | Bcav_2057 | Bcav_2063 | Transcriptional regulator-like protein. | PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DSHCT (NUC185) domain. | 0.691 |
Bcav_2057 | tatA | Bcav_2057 | Bcav_2060 | Transcriptional regulator-like protein. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.797 |
Bcav_2057 | tatC | Bcav_2057 | Bcav_2061 | Transcriptional regulator-like protein. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.642 |
Bcav_2058 | Bcav_2057 | Bcav_2058 | Bcav_2057 | Conserved hypothetical protein. | Transcriptional regulator-like protein. | 0.994 |
Bcav_2058 | Bcav_2059 | Bcav_2058 | Bcav_2059 | Conserved hypothetical protein. | Hypothetical protein. | 0.762 |
Bcav_2058 | Bcav_2062 | Bcav_2058 | Bcav_2062 | Conserved hypothetical protein. | PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU). | 0.642 |
Bcav_2058 | Bcav_2063 | Bcav_2058 | Bcav_2063 | Conserved hypothetical protein. | PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DSHCT (NUC185) domain. | 0.671 |
Bcav_2058 | tatA | Bcav_2058 | Bcav_2060 | Conserved hypothetical protein. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.797 |
Bcav_2058 | tatC | Bcav_2058 | Bcav_2061 | Conserved hypothetical protein. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.642 |
Bcav_2059 | Bcav_2057 | Bcav_2059 | Bcav_2057 | Hypothetical protein. | Transcriptional regulator-like protein. | 0.762 |
Bcav_2059 | Bcav_2058 | Bcav_2059 | Bcav_2058 | Hypothetical protein. | Conserved hypothetical protein. | 0.762 |
Bcav_2059 | Bcav_2062 | Bcav_2059 | Bcav_2062 | Hypothetical protein. | PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU). | 0.603 |
Bcav_2059 | Bcav_2063 | Bcav_2059 | Bcav_2063 | Hypothetical protein. | PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DSHCT (NUC185) domain. | 0.569 |
Bcav_2059 | tatA | Bcav_2059 | Bcav_2060 | Hypothetical protein. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.773 |
Bcav_2059 | tatC | Bcav_2059 | Bcav_2061 | Hypothetical protein. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.617 |
Bcav_2062 | Bcav_2057 | Bcav_2062 | Bcav_2057 | PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU). | Transcriptional regulator-like protein. | 0.642 |
Bcav_2062 | Bcav_2058 | Bcav_2062 | Bcav_2058 | PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU). | Conserved hypothetical protein. | 0.642 |
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