Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_0481 | Bcav_3171 | PFAM: ABC-2 type transporter. | PFAM: ABC transporter. | 0.622 |
Bcav_0481 | Bcav_3172 | PFAM: ABC-2 type transporter. | PFAM: ABC-2 type transporter. | 0.705 |
Bcav_0481 | Bcav_3543 | PFAM: ABC-2 type transporter. | PFAM: ABC-2 type transporter. | 0.446 |
Bcav_1227 | Bcav_3171 | PFAM: CBS domain pair; ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit. | PFAM: ABC transporter. | 0.607 |
Bcav_1586 | Bcav_3171 | PFAM: ABC-2 type transporter. | PFAM: ABC transporter. | 0.444 |
Bcav_3170 | Bcav_3171 | Protein of unknown function DUF661; PFAM: Uncharacterised BCR (COG3801). | PFAM: ABC transporter. | 0.545 |
Bcav_3170 | Bcav_3172 | Protein of unknown function DUF661; PFAM: Uncharacterised BCR (COG3801). | PFAM: ABC-2 type transporter. | 0.545 |
Bcav_3170 | Bcav_3173 | Protein of unknown function DUF661; PFAM: Uncharacterised BCR (COG3801). | PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase. | 0.504 |
Bcav_3170 | Bcav_3174 | Protein of unknown function DUF661; PFAM: Uncharacterised BCR (COG3801). | Putative lipase transmembrane protein. | 0.504 |
Bcav_3171 | Bcav_0481 | PFAM: ABC transporter. | PFAM: ABC-2 type transporter. | 0.622 |
Bcav_3171 | Bcav_1227 | PFAM: ABC transporter. | PFAM: CBS domain pair; ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit. | 0.607 |
Bcav_3171 | Bcav_1586 | PFAM: ABC transporter. | PFAM: ABC-2 type transporter. | 0.444 |
Bcav_3171 | Bcav_3170 | PFAM: ABC transporter. | Protein of unknown function DUF661; PFAM: Uncharacterised BCR (COG3801). | 0.545 |
Bcav_3171 | Bcav_3172 | PFAM: ABC transporter. | PFAM: ABC-2 type transporter. | 0.963 |
Bcav_3171 | Bcav_3173 | PFAM: ABC transporter. | PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase. | 0.709 |
Bcav_3171 | Bcav_3174 | PFAM: ABC transporter. | Putative lipase transmembrane protein. | 0.709 |
Bcav_3171 | Bcav_3543 | PFAM: ABC transporter. | PFAM: ABC-2 type transporter. | 0.675 |
Bcav_3172 | Bcav_0481 | PFAM: ABC-2 type transporter. | PFAM: ABC-2 type transporter. | 0.705 |
Bcav_3172 | Bcav_3170 | PFAM: ABC-2 type transporter. | Protein of unknown function DUF661; PFAM: Uncharacterised BCR (COG3801). | 0.545 |
Bcav_3172 | Bcav_3171 | PFAM: ABC-2 type transporter. | PFAM: ABC transporter. | 0.963 |
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