Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_3196 | Bcav_3197 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Bcav_3196 | Bcav_3198 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3196 | Bcav_3199 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3196 | Bcav_3200 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3196 | Bcav_3201 | Conserved hypothetical protein. | RarD protein, DMT superfamily transporter; PFAM: Integral membrane protein DUF6; TIGRFAM: rarD protein. | 0.563 |
Bcav_3197 | Bcav_3196 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Bcav_3197 | Bcav_3198 | Conserved hypothetical protein. | Hypothetical protein. | 0.778 |
Bcav_3197 | Bcav_3199 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3197 | Bcav_3200 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3197 | Bcav_3201 | Conserved hypothetical protein. | RarD protein, DMT superfamily transporter; PFAM: Integral membrane protein DUF6; TIGRFAM: rarD protein. | 0.563 |
Bcav_3198 | Bcav_3196 | Hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Bcav_3198 | Bcav_3197 | Hypothetical protein. | Conserved hypothetical protein. | 0.778 |
Bcav_3198 | Bcav_3199 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3198 | Bcav_3200 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3198 | Bcav_3201 | Hypothetical protein. | RarD protein, DMT superfamily transporter; PFAM: Integral membrane protein DUF6; TIGRFAM: rarD protein. | 0.563 |
Bcav_3198 | Bcav_3203 | Hypothetical protein. | PFAM: Protein of unknown function (DUF690). | 0.689 |
Bcav_3198 | Bcav_3204 | Hypothetical protein. | PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4. | 0.699 |
Bcav_3198 | Bcav_3206 | Hypothetical protein. | Protein of unknown function DUF909; PFAM: Proteins of 100 residues with WXG; Belongs to the WXG100 family. | 0.757 |
Bcav_3198 | Bcav_3211 | Hypothetical protein. | Protein of unknown function DUF909; PFAM: Proteins of 100 residues with WXG. | 0.757 |
Bcav_3198 | Bcav_3214 | Hypothetical protein. | Cell divisionFtsK/SpoIIIE; PFAM: FtsK/SpoIIIE family. | 0.631 |
page 1 of 3