Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcav_3203PFAM: Protein of unknown function (DUF690). (459 aa)    
Predicted Functional Partners:
Bcav_3202
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family.
 
 0.995
Bcav_3204
PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4.
 
 
 0.969
Bcav_3206
Protein of unknown function DUF909; PFAM: Proteins of 100 residues with WXG; Belongs to the WXG100 family.
 
 
 0.917
Bcav_3214
Cell divisionFtsK/SpoIIIE; PFAM: FtsK/SpoIIIE family.
 
 
 0.904
Bcav_3211
Protein of unknown function DUF909; PFAM: Proteins of 100 residues with WXG.
 
 
 0.884
Bcav_3209
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family.
 
 
 0.836
Bcav_0877
Rhs protein.
  
 
   0.782
Bcav_1045
Hypothetical protein.
  
 
   0.771
Bcav_3563
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family.
 
 
 0.758
Bcav_3198
Hypothetical protein.
  
     0.689
Your Current Organism:
Beutenbergia cavernae
NCBI taxonomy Id: 471853
Other names: B. cavernae DSM 12333, Beutenbergia cavernae DSM 12333, Beutenbergia cavernae str. DSM 12333, Beutenbergia cavernae strain DSM 12333
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