STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_0580TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: fjo:Fjoh_2731 CzcA family heavy metal efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1038 aa)    
Predicted Functional Partners:
Dfer_0579
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: fjo:Fjoh_2732 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.928
Dfer_0578
PFAM: outer membrane efflux protein; KEGG: fjo:Fjoh_2733 outer membrane efflux protein.
 
  
 0.889
Dfer_2746
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: fjo:Fjoh_2732 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.861
Dfer_1812
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: fjo:Fjoh_4294 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.860
Dfer_0996
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: fjo:Fjoh_3932 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.838
Dfer_1589
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: fjo:Fjoh_3345 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.803
Dfer_1811
PFAM: outer membrane efflux protein; KEGG: fjo:Fjoh_4293 outer membrane efflux protein.
 
  
 0.794
Dfer_2745
PFAM: outer membrane efflux protein; KEGG: chu:CHU_0829 outer membrane protein; cation efflux protein.
 
  
 0.793
Dfer_3160
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: acriflavin resistance protein; secretion protein HlyD family protein; KEGG: fjo:Fjoh_4285 acriflavin resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
0.553
Dfer_2559
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cts:Ctha_1210 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.551
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.