STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_1241PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: chu:CHU_1360 electron transfer flavoprotein, alpha subunit. (324 aa)    
Predicted Functional Partners:
Dfer_1240
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: chu:CHU_1359 electron transfer flavoprotein, beta subunit.
 0.999
Dfer_3002
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fjo:Fjoh_1932 acyl-CoA dehydrogenase domain- containing protein.
 
 0.997
Dfer_3822
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: chu:CHU_3827 bytyryl-CoA dehydrogenase (short- chain-acyl-CoA dehydrogenase).
 
 0.997
Dfer_2638
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: chu:CHU_1408 acyl-CoA dehydrogenase.
 
 0.996
Dfer_3549
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: chu:CHU_3589 acyl-CoA dehydrogenase.
 
 0.990
Dfer_5685
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: gfo:GFO_0313 acyl-CoA dehydrogenase.
 
 0.988
Dfer_3526
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: chu:CHU_3591 4-enzyme protein: 3-hydroxyacyl- CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase.
 
 
 0.817
Dfer_3632
PFAM: Transketolase domain protein; dehydrogenase E1 component; Transketolase central region; KEGG: aas:Aasi_0324 hypothetical protein.
  
 
 0.773
Dfer_3077
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: chu:CHU_3429 oxidoreductase.
  
 
 0.736
Dfer_3155
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: chu:CHU_3429 oxidoreductase.
  
 
 0.736
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.