STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_2005PFAM: FAD dependent oxidoreductase; KEGG: LOC656064; similar to CG8256-PC, isoform C; K00111 glycerol-3-phosphate dehydrogenase. (543 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 0.993
Dfer_2143
PFAM: carbohydrate kinase FGGY; KEGG: chy:CHY_1839 glycerol kinase; Belongs to the FGGY kinase family.
 
 0.992
Dfer_3541
PFAM: major intrinsic protein; KEGG: azc:AZC_2711 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.934
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; KEGG: chu:CHU_1307 glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.929
plsY
Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
 0.918
Dfer_5689
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: fjo:Fjoh_0969 phospholipid/glycerol acyltransferase.
    
 0.825
Dfer_2004
KEGG: chu:CHU_0383 hypothetical protein.
       0.682
Dfer_3632
PFAM: Transketolase domain protein; dehydrogenase E1 component; Transketolase central region; KEGG: aas:Aasi_0324 hypothetical protein.
  
    0.553
Dfer_1764
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: chu:CHU_1005 glycerophosphodiester phosphodiesterase.
 
 
 0.519
Dfer_1021
Trehalose-phosphatase; KEGG: chu:CHU_0400 glycosyltransferase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase family 20; Haloacid dehalogenase domain protein hydrolase type 3; trehalose- phosphatase.
 
  
 0.510
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.