STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_2668PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: fjo:Fjoh_3520 glycerophosphoryl diester phosphodiesterase. (271 aa)    
Predicted Functional Partners:
Dfer_3909
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sus:Acid_6993 glycerophosphoryl diester phosphodiesterase.
  
  
  0.972
Dfer_3134
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pdi:BDI_3922 glycerophosphoryl diester phosphodiesterase.
  
  
  0.962
Dfer_5073
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pdi:BDI_3922 glycerophosphoryl diester phosphodiesterase.
  
  
  0.949
Dfer_3215
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bth:BT_3162 glycerophosphoryl diester phosphodiesterase.
  
  
 
0.927
Dfer_1764
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: chu:CHU_1005 glycerophosphodiester phosphodiesterase.
     
  0.900
Dfer_4931
PFAM: glycoside hydrolase family 16; KEGG: sru:SRU_2844 beta-glucanase precursor.
 
      0.899
Dfer_4667
PFAM: glycoside hydrolase family 16; KEGG: sus:Acid_4825 glycoside hydrolase family protein.
 
      0.863
Dfer_4139
Beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: tle:Tlet_1296 glycoside hydrolase family protein.
 
 
    0.770
Dfer_2682
PFAM: lipolytic protein G-D-S-L family; KEGG: pdi:BDI_0534 putative acetylhydrolase.
      0.611
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein B; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
       0.568
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.