STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_2786KEGG: fjo:Fjoh_3974 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase. (369 aa)    
Predicted Functional Partners:
Dfer_4486
PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bth:BT_3587 glucosamine-6-phosphate deaminase.
 0.991
Dfer_3264
PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: vei:Veis_1394 glucosamine-6-phosphate deaminase.
 0.986
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.986
Dfer_3813
TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; LmbE family protein; KEGG: fjo:Fjoh_2381 glucosamine-6-phosphate deaminase-like protein.
 0.976
Dfer_2815
Glucosamine-6-phosphate deaminase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: lin:lin0875 hypothetical protein.
 0.930
Dfer_4487
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bth:BT_3588 N-acetylglucosamine-6-phosphate deacetylase.
  
  
 
0.925
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.921
Dfer_3693
KEGG: bfs:BF4186 amidophosphoribosyl-transferase.
  
    0.630
Dfer_1887
KEGG: rba:RB7871 signal peptide.
  
 
 0.625
Dfer_3218
KEGG: rrs:RoseRS_4114 hypothetical protein.
  
 
 0.625
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.