Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Dfer_1376 | Dfer_2810 | KEGG: gfo:GFO_3198 conserved hypothetical protein, membrane or secreted. | KEGG: dol:Dole_0977 hypothetical protein. | 0.679 |
Dfer_1376 | Dfer_2812 | KEGG: gfo:GFO_3198 conserved hypothetical protein, membrane or secreted. | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | 0.632 |
Dfer_2809 | Dfer_2810 | KEGG: dol:Dole_0976 membrane protein. | KEGG: dol:Dole_0977 hypothetical protein. | 0.581 |
Dfer_2809 | Dfer_2811 | KEGG: dol:Dole_0976 membrane protein. | Hypothetical protein; KEGG: bba:Bd0340 lipase/acylhydrolase domain- containing protein. | 0.447 |
Dfer_2809 | Dfer_2812 | KEGG: dol:Dole_0976 membrane protein. | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | 0.413 |
Dfer_2810 | Dfer_1376 | KEGG: dol:Dole_0977 hypothetical protein. | KEGG: gfo:GFO_3198 conserved hypothetical protein, membrane or secreted. | 0.679 |
Dfer_2810 | Dfer_2809 | KEGG: dol:Dole_0977 hypothetical protein. | KEGG: dol:Dole_0976 membrane protein. | 0.581 |
Dfer_2810 | Dfer_2811 | KEGG: dol:Dole_0977 hypothetical protein. | Hypothetical protein; KEGG: bba:Bd0340 lipase/acylhydrolase domain- containing protein. | 0.589 |
Dfer_2810 | Dfer_2812 | KEGG: dol:Dole_0977 hypothetical protein. | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | 0.891 |
Dfer_2811 | Dfer_2809 | Hypothetical protein; KEGG: bba:Bd0340 lipase/acylhydrolase domain- containing protein. | KEGG: dol:Dole_0976 membrane protein. | 0.447 |
Dfer_2811 | Dfer_2810 | Hypothetical protein; KEGG: bba:Bd0340 lipase/acylhydrolase domain- containing protein. | KEGG: dol:Dole_0977 hypothetical protein. | 0.589 |
Dfer_2811 | Dfer_2812 | Hypothetical protein; KEGG: bba:Bd0340 lipase/acylhydrolase domain- containing protein. | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | 0.696 |
Dfer_2812 | Dfer_1376 | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | KEGG: gfo:GFO_3198 conserved hypothetical protein, membrane or secreted. | 0.632 |
Dfer_2812 | Dfer_2809 | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | KEGG: dol:Dole_0976 membrane protein. | 0.413 |
Dfer_2812 | Dfer_2810 | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | KEGG: dol:Dole_0977 hypothetical protein. | 0.891 |
Dfer_2812 | Dfer_2811 | PFAM: Carbamoyltransferase; KEGG: ter:Tery_1703 carbamoyltransferase. | Hypothetical protein; KEGG: bba:Bd0340 lipase/acylhydrolase domain- containing protein. | 0.696 |