STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_3760PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fps:FP0584 ABC transporter ATPase. (236 aa)    
Predicted Functional Partners:
Dfer_3939
PFAM: protein of unknown function DUF214; KEGG: fps:FP2415 ABC transporter permease.
   0.985
Dfer_5607
PFAM: protein of unknown function DUF214; KEGG: fps:FP2022 ABC transporter permease.
   0.985
Dfer_5420
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0715 FtsX family membrane protein (predicted permease).
 
 
 0.956
Dfer_5431
PFAM: protein of unknown function DUF214; KEGG: bth:BT_1465 putative ABC transporter permease.
 
 
 0.956
Dfer_1120
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0712 FtsX family membrane protein (predicted permease).
 
 
 0.955
Dfer_1806
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0715 FtsX family membrane protein (predicted permease).
 
 
 0.955
Dfer_1539
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0712 FtsX family membrane protein (predicted permease).
 
 
 0.954
Dfer_1753
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0712 FtsX family membrane protein (predicted permease).
 
 
 0.954
Dfer_4859
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0712 FtsX family membrane protein (predicted permease).
 
 
 0.953
Dfer_1804
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_0712 FtsX family membrane protein (predicted permease).
 
 
 0.952
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.