Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Dfer_5332 | Dfer_5333 | PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. | PFAM: N-acylglucosamine 2-epimerase; KEGG: bth:BT_3605 N-acylglucosamine 2-epimerase. | 0.636 |
Dfer_5332 | Dfer_5334 | PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | 0.636 |
Dfer_5332 | Dfer_5335 | PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. | PFAM: ROK family protein; KEGG: bth:BT_0433 putative xylose repressor. | 0.527 |
Dfer_5333 | Dfer_5332 | PFAM: N-acylglucosamine 2-epimerase; KEGG: bth:BT_3605 N-acylglucosamine 2-epimerase. | PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. | 0.636 |
Dfer_5333 | Dfer_5334 | PFAM: N-acylglucosamine 2-epimerase; KEGG: bth:BT_3605 N-acylglucosamine 2-epimerase. | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | 0.777 |
Dfer_5333 | Dfer_5335 | PFAM: N-acylglucosamine 2-epimerase; KEGG: bth:BT_3605 N-acylglucosamine 2-epimerase. | PFAM: ROK family protein; KEGG: bth:BT_0433 putative xylose repressor. | 0.756 |
Dfer_5334 | Dfer_5332 | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. | 0.636 |
Dfer_5334 | Dfer_5333 | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | PFAM: N-acylglucosamine 2-epimerase; KEGG: bth:BT_3605 N-acylglucosamine 2-epimerase. | 0.777 |
Dfer_5334 | Dfer_5335 | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | PFAM: ROK family protein; KEGG: bth:BT_0433 putative xylose repressor. | 0.649 |
Dfer_5334 | Dfer_5741 | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | PFAM: protein of unknown function DUF718; KEGG: fjo:Fjoh_2046 hypothetical protein. | 0.471 |
Dfer_5335 | Dfer_5332 | PFAM: ROK family protein; KEGG: bth:BT_0433 putative xylose repressor. | PFAM: PKD domain containing protein; Carbohydrate binding family 6; cytochrome c class I; SMART: PKD domain containing protein; cellulose binding type IV; KEGG: sen:SACE_2991 secreted glycosyl hydrolase. | 0.527 |
Dfer_5335 | Dfer_5333 | PFAM: ROK family protein; KEGG: bth:BT_0433 putative xylose repressor. | PFAM: N-acylglucosamine 2-epimerase; KEGG: bth:BT_3605 N-acylglucosamine 2-epimerase. | 0.756 |
Dfer_5335 | Dfer_5334 | PFAM: ROK family protein; KEGG: bth:BT_0433 putative xylose repressor. | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | 0.649 |
Dfer_5741 | Dfer_5334 | PFAM: protein of unknown function DUF718; KEGG: fjo:Fjoh_2046 hypothetical protein. | TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter. | 0.471 |