STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_5518Hypothetical protein. (1611 aa)    
Predicted Functional Partners:
Dfer_5516
Hypothetical protein.
       0.773
Dfer_5517
Hypothetical protein; KEGG: spv:SPH_0060 prophage LambdaSa04, tail tape measure family protein.
       0.773
Dfer_5519
Hypothetical protein; KEGG: cti:RALTA_A0915 bacteriophage large tail fiber protein.
       0.741
Dfer_5520
Hypothetical protein; KEGG: bpl:BURPS1106A_A1951 membrane-anchored cell surface protein.
       0.741
Dfer_5521
KEGG: rci:RCIX1999 hypothetical protein.
       0.658
Dfer_5522
Hypothetical protein.
       0.658
Dfer_5515
Hypothetical protein.
       0.645
Dfer_5523
PFAM: beta-lactamase; KEGG: mxa:MXAN_2321 beta-lactamase.
       0.548
Dfer_5514
Hypothetical protein.
       0.492
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.