STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV21279.1Predicted transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family. (156 aa)    
Predicted Functional Partners:
ACV21280.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
 
    0.877
ACV21278.1
Formate-dependent nitrite reductase, membrane component; PFAM: Polysulphide reductase, NrfD.
       0.741
ACV21865.1
Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II.
  
   
 0.446
ACV21813.1
Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II.
  
   
 0.427
ACV21281.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
       0.408
ACV21277.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
       0.400
Your Current Organism:
Slackia heliotrinireducens
NCBI taxonomy Id: 471855
Other names: S. heliotrinireducens DSM 20476, Slackia heliotrinireducens DSM 20476, Slackia heliotrinireducens str. DSM 20476, Slackia heliotrinireducens strain DSM 20476
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.