STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0268PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2911 ABC alpha-glucoside transporter inner membrane binding protein. (334 aa)    
Predicted Functional Partners:
Jden_0269
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_0294 binding-protein-dependent transport systems inner membrane component.
  0.994
Jden_0267
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_1045 alpha-glucosides-binding periplasmic protein AglE precursor.
 
  0.990
Jden_2065
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bsu:BSU38810 multiple sugar-binding transport ATP-binding protein.
 
 0.969
Jden_0277
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_5517 ABC transporter related.
     
  0.900
Jden_0279
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_5517 ABC transporter related.
     
  0.900
Jden_1525
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A4117 maltosaccharide ABC transporter, permease protein.
 
 0.841
Jden_0511
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1866 sugar transport system (permease) (binding protein dependent transporter).
   0.814
Jden_2070
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02026 multiple sugar transport system permease protein.
   0.799
Jden_1757
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_1731 putative sugar ABC transporter, permease protein.
   0.780
Jden_0236
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_3667 binding-protein-dependent transport systems inner membrane component.
 
   0.734
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.