STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0649Hypothetical protein. (217 aa)    
Predicted Functional Partners:
Jden_0648
KEGG: mxa:MXAN_7409 hypothetical protein.
       0.773
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.773
Jden_0139
Hypothetical protein.
  
 
 0.770
Jden_0556
Hypothetical protein; KEGG: bph:Bphy_0958 alcohol dehydrogenase.
  
 
 0.770
Jden_2490
PFAM: protein of unknown function DUF571; KEGG: hypothetical protein.
   
    0.636
Jden_0646
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: hch:HCH_00144 ABC-type multidrug transport system, ATPase and permease components.
       0.557
Jden_0647
PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: bha:BH2336 ABC transporter ATP-binding protein.
       0.557
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.529
Jden_1748
PFAM: SMC domain protein; KEGG: neu:NE2310 ABC transporter.
  
 
 0.529
Jden_2178
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: dno:DNO_0755 phage tail tape measure family protein.
  
 
 0.529
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.