STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0726PFAM: Aldose 1-epimerase; KEGG: atc:AGR_L_1546 hypothetical protein. (328 aa)    
Predicted Functional Partners:
Jden_2211
TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: aba:Acid345_1701 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.981
Jden_0104
Beta-galactosidase; PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: similar to Ect3 CG3132-PA.
 
 
 0.920
Jden_0311
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bha:BH3701 beta-galactosidase.
  
 
 0.906
Jden_0378
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase.
  
 
 0.906
Jden_0514
KEGG: sus:Acid_1472 glycoside hydrolase, clan GH-D.
  
 
  0.906
Jden_1764
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bha:BH3701 beta-galactosidase.
  
 
 0.906
Jden_2397
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase.
  
 
 0.906
Jden_2479
PFAM: glycoside hydrolase clan GH-D; KEGG: mmw:Mmwyl1_2011 glycoside hydrolase clan GH-D.
  
 
  0.906
Jden_0238
PFAM: ROK family protein; KEGG: sfu:Sfum_1953 ROK family protein.
    
 0.904
Jden_1441
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mxa:MXAN_6497 glucokinase.
    
 0.904
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.