STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0972Dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain- containing protein; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase. (331 aa)    
Predicted Functional Partners:
Jden_0973
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: gdi:GDI0264 putative PTS-dependent dihydroxyacetone kinase.
  
  0.999
Jden_0974
TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; PTS system fructose subfamily IIA component; KEGG: spe:Spro_4270 dihydroxyacetone kinase subunit M.
 
 0.999
Jden_0488
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: bcy:Bcer98_1468 DeoR family transcriptional regulator.
     0.917
Jden_0487
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_2018 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.829
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: dvu:DVU3159 glycerol-3-phosphate dehydrogenase (NAD(P)+).
   
 
 0.809
Jden_0975
Hypothetical protein.
       0.709
Jden_1221
KEGG: mxa:MXAN_6299 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
 
 
  
 0.678
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
    0.588
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.581
Jden_0971
TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
       0.509
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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