STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_1123Hypothetical protein. (49 aa)    
Predicted Functional Partners:
Jden_1124
KEGG: pca:Pcar_1058 rRNA methylase; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein.
       0.773
nadK
NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.773
Jden_1126
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.773
Jden_1127
PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: bha:BH2771 hypothetical protein.
       0.773
Jden_1128
Hypothetical protein; KEGG: gme:Gmet_2478 methyl-accepting chemotaxis sensory transducer.
       0.603
Jden_1129
Hypothetical protein; KEGG: similar to GTPase, IMAP family member 8.
       0.603
Jden_1130
PFAM: virulence factor MVIN family protein; KEGG: reh:H16_A3066 hypothetical membrane protein in MviN family.
       0.603
Jden_1131
PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_A2365 putative glycosyl transferase, group 1.
       0.603
Jden_1121
KEGG: hypothetical protein.
       0.586
Jden_1122
TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bat:BAS4827 phosphatase.
       0.586
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.