STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_1930PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_2772 ABC transporter related. (264 aa)    
Predicted Functional Partners:
Jden_1931
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2771 binding-protein-dependent transport systems inner membrane component.
  
 0.998
Jden_0243
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dppC; ABC transporter membrane spanning protein (dipeptide); K02034 peptide/nickel transport system permease protein.
  
 0.993
Jden_0787
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component.
  
 0.993
Jden_1932
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2770 binding-protein-dependent transport systems inner membrane component.
 
 0.989
Jden_0242
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dipeptide ABC transporter; K02033 peptide/nickel transport system permease protein.
 
 0.948
Jden_1933
PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_0459 extracellular solute-binding protein, family 5.
  
 0.934
Jden_0786
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_2317 peptide ABC transporter, permease protein.
 
 0.919
Jden_1929
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_3617 ABC transporter-related protein.
 
  
0.916
Jden_0407
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esa:ESA_02459 macrolide transporter ATP- binding/permease protein.
 
    
0.904
Jden_0692
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sugar ABC transporter.
 
     
0.900
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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