STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_2029PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bcz:BCZK1521 flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (134 aa)    
Predicted Functional Partners:
Jden_2027
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.999
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bha:BH2459 flagellar hook-basal body protein FliE.
 
 
 0.999
Jden_2030
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.999
Jden_2019
PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; KEGG: aba:Acid345_1645 flagellar basal body FlaE.
 
 
 0.998
Jden_2020
PFAM: flagellar hook capping protein; KEGG: bja:bll6853 flagellar basal body rod modification protein.
 
 
 0.998
Jden_2026
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bsu:BSU16220 flagellar motor switch protein G.
 
  
 0.998
Jden_2024
ATPase, FliI/YscN family; KEGG: dvu:DVU0310 flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
 
  
 0.997
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.996
Jden_2013
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rpi:Rpic_4755 flagellar motor switch protein FliN.
 
 
 0.996
Jden_2033
TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: bha:BH3613 flagellar protein FliS.
 
  
 0.995
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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