STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_2165Hypothetical protein. (593 aa)    
Predicted Functional Partners:
Jden_2166
PFAM: protein of unknown function DUF1483.
       0.819
Jden_2164
Hypothetical protein.
       0.803
Jden_2167
Hypothetical protein.
       0.780
Jden_2163
KEGG: bte:BTH_I3137 hypothetical protein.
       0.676
Jden_2169
PFAM: major capsid protein HK97; KEGG: bca:BCE_0400 HK97 family phage major capsid protein.
       0.648
Jden_2162
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: Os07g0170200; hypothetical protein.
  
  
 0.610
Jden_2168
Hypothetical protein; KEGG: bvi:Bcep1808_1466 translation initiation factor IF-2.
       0.598
Jden_2172
Hypothetical protein.
       0.526
Jden_2170
Hypothetical protein.
       0.511
Jden_2171
Hypothetical protein.
       0.511
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.