STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_2325Hypothetical protein. (202 aa)    
Predicted Functional Partners:
Jden_2324
Hypothetical protein.
       0.787
Jden_2323
Hypothetical protein.
       0.779
Jden_2326
KEGG: hypothetical protein.
       0.701
Jden_2327
Hypothetical protein.
       0.701
Jden_2169
PFAM: major capsid protein HK97; KEGG: bca:BCE_0400 HK97 family phage major capsid protein.
   
   0.665
Jden_2321
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: similar to titin isoform N2-A.
       0.643
Jden_2322
Hypothetical protein; KEGG: rpd:RPD_1920 twin-arginine translocation pathway signal.
       0.634
Jden_2320
TIGRFAM: phage tape measure protein; KEGG: bha:BH3518 hypothetical protein.
       0.629
Jden_2328
KEGG: nwi:Nwi_1540 hypothetical protein.
       0.598
Jden_2329
Hypothetical protein.
       0.546
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.