STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95121.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
ACU95120.1
Sortase (surface protein transpeptidase); PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein.
 
   
 0.940
ACU96195.1
Hypothetical protein.
  
     0.642
ACU97838.1
Hypothetical protein.
  
     0.553
ACU95734.1
Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold.
  
     0.537
ACU96561.1
Hypothetical protein.
  
     0.533
ACU95576.1
Hypothetical protein.
  
     0.490
ACU96408.1
Hypothetical protein.
  
     0.490
ACU97435.1
Predicted membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
  
     0.489
ACU96560.1
Hypothetical protein.
  
     0.488
crgA
Uncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
 
     0.479
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.