STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95147.1PFAM: Copper resistance protein D. (343 aa)    
Predicted Functional Partners:
ACU95150.1
Uncharacterized conserved protein; PFAM: Domain of unkown function (DUF1775).
 
  
 0.853
ACU95149.1
PFAM: Copper resistance protein CopC.
 
  
 0.815
ACU96390.1
PFAM: DNA polymerase family A.
  
     0.575
ACU98792.1
Hypothetical protein.
  
     0.575
ACU98907.1
Hypothetical protein.
  
     0.563
ACU98355.1
Hypothetical protein.
  
     0.545
ACU95148.1
PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.499
ACU98764.1
Hypothetical protein.
  
     0.496
ACU96323.1
PFAM: Barstar (barnase inhibitor).
  
     0.492
ACU95896.1
PFAM: Prenyltransferase and squalene oxidase repeat.
 
     0.491
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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