STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95181.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
ACU95182.1
Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF952).
       0.747
ACU97585.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
     0.704
leuS
PFAM: tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.653
ACU95179.1
Hypothetical protein.
 
     0.549
ACU95178.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
    0.537
ACU95180.1
PFAM: CutA1 divalent ion tolerance protein.
       0.533
ACU95184.1
Hypothetical protein.
       0.483
ACU95183.1
PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.468
ACU95677.1
TIGRFAM: conserved hypothetical protein TIGR03089.
  
     0.452
ACU95375.1
Fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase family.
 
    0.447
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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