Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACU95179.1 | ACU95332.1 | Svir_00910 | Svir_02500 | Hypothetical protein. | PFAM: Protein of unknown function (DUF2516). | 0.606 |
ACU95179.1 | ACU95735.1 | Svir_00910 | Svir_06640 | Hypothetical protein. | Hypothetical protein. | 0.768 |
ACU95179.1 | ACU97749.1 | Svir_00910 | Svir_27680 | Hypothetical protein. | Hypothetical protein. | 0.765 |
ACU95179.1 | ACU97874.1 | Svir_00910 | Svir_28950 | Hypothetical protein. | Hypothetical protein. | 0.771 |
ACU95330.1 | ACU95331.1 | Svir_02480 | Svir_02490 | PFAM: Helix-turn-helix. | Hypothetical protein. | 0.855 |
ACU95330.1 | ACU95332.1 | Svir_02480 | Svir_02500 | PFAM: Helix-turn-helix. | PFAM: Protein of unknown function (DUF2516). | 0.635 |
ACU95330.1 | ACU95333.1 | Svir_02480 | Svir_02510 | PFAM: Helix-turn-helix. | Uncharacterized conserved protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain. | 0.510 |
ACU95330.1 | ACU95334.1 | Svir_02480 | Svir_02520 | PFAM: Helix-turn-helix. | PFAM: Polyketide cyclase / dehydrase and lipid transport. | 0.479 |
ACU95330.1 | ACU95335.1 | Svir_02480 | Svir_02530 | PFAM: Helix-turn-helix. | Predicted NADP-dependent oxidoreductase; PFAM: Zinc-binding dehydrogenase. | 0.407 |
ACU95331.1 | ACU95330.1 | Svir_02490 | Svir_02480 | Hypothetical protein. | PFAM: Helix-turn-helix. | 0.855 |
ACU95331.1 | ACU95332.1 | Svir_02490 | Svir_02500 | Hypothetical protein. | PFAM: Protein of unknown function (DUF2516). | 0.635 |
ACU95331.1 | ACU95333.1 | Svir_02490 | Svir_02510 | Hypothetical protein. | Uncharacterized conserved protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain. | 0.510 |
ACU95331.1 | ACU95334.1 | Svir_02490 | Svir_02520 | Hypothetical protein. | PFAM: Polyketide cyclase / dehydrase and lipid transport. | 0.407 |
ACU95331.1 | ACU95335.1 | Svir_02490 | Svir_02530 | Hypothetical protein. | Predicted NADP-dependent oxidoreductase; PFAM: Zinc-binding dehydrogenase. | 0.407 |
ACU95332.1 | ACU95179.1 | Svir_02500 | Svir_00910 | PFAM: Protein of unknown function (DUF2516). | Hypothetical protein. | 0.606 |
ACU95332.1 | ACU95330.1 | Svir_02500 | Svir_02480 | PFAM: Protein of unknown function (DUF2516). | PFAM: Helix-turn-helix. | 0.635 |
ACU95332.1 | ACU95331.1 | Svir_02500 | Svir_02490 | PFAM: Protein of unknown function (DUF2516). | Hypothetical protein. | 0.635 |
ACU95332.1 | ACU95333.1 | Svir_02500 | Svir_02510 | PFAM: Protein of unknown function (DUF2516). | Uncharacterized conserved protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain. | 0.775 |
ACU95332.1 | ACU95334.1 | Svir_02500 | Svir_02520 | PFAM: Protein of unknown function (DUF2516). | PFAM: Polyketide cyclase / dehydrase and lipid transport. | 0.642 |
ACU95332.1 | ACU95335.1 | Svir_02500 | Svir_02530 | PFAM: Protein of unknown function (DUF2516). | Predicted NADP-dependent oxidoreductase; PFAM: Zinc-binding dehydrogenase. | 0.642 |
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