STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95335.1Predicted NADP-dependent oxidoreductase; PFAM: Zinc-binding dehydrogenase. (332 aa)    
Predicted Functional Partners:
ACU95334.1
PFAM: Polyketide cyclase / dehydrase and lipid transport.
       0.773
ACU95333.1
Uncharacterized conserved protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain.
       0.682
ACU95332.1
PFAM: Protein of unknown function (DUF2516).
       0.642
ACU96890.1
Predicted aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
 
    0.511
ACU96710.1
Predicted aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
 
    0.488
ACU96815.1
Predicted aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
 
    0.472
ACU98467.1
PFAM: Glycosyl hydrolases family 15; Trehalose-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase.
   
    0.422
ACU97062.1
Zn-dependent oxidoreductase, NADPH:quinone reductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
 
  
 0.418
ACU95330.1
PFAM: Helix-turn-helix.
       0.407
ACU95331.1
Hypothetical protein.
       0.407
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.