STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95603.1Glycosidase; PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain. (479 aa)    
Predicted Functional Partners:
ACU96215.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
 
  
 0.941
ACU97829.1
PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases.
  
 0.940
ACU97810.1
Uncharacterized conserved protein; PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF1957); Belongs to the glycosyl hydrolase 57 family.
     
 0.911
ACU98467.1
PFAM: Glycosyl hydrolases family 15; Trehalose-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase.
  
 
 0.672
ACU97785.1
Glutamate synthase (NADH) large subunit; PFAM: GXGXG motif; Glutamate synthase central domain; Conserved region in glutamate synthase; Glutamine amidotransferases class-II.
  
  
 0.605
ACU96692.1
PFAM: Amino acid permease.
   
 0.550
ACU97047.1
PFAM: Amino acid permease.
   
 0.550
ACU97156.1
PFAM: Amino acid permease.
   
 0.550
ACU97172.1
PFAM: Amino acid permease.
   
 0.550
ACU97365.1
PFAM: Amino acid permease.
   
 0.550
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.