STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95604.1Ribonuclease, putative; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease, putative. (366 aa)    
Predicted Functional Partners:
ACU95605.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
    0.631
tatB
Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
 
   
 0.523
ACU95932.1
ACT domain-containing protein; PFAM: ACT domain.
 
    0.509
ACU95603.1
Glycosidase; PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain.
  
  
 0.504
ACU97874.1
Hypothetical protein.
 
     0.500
ACU96991.1
PFAM: YeeE/YedE family (DUF395).
 
     0.455
ACU97340.1
Hypothetical protein.
 
    0.421
ACU98122.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.